aSynPEP-DB
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Dataset File format Description
Database records .csv Full comprehensive information collected in aSynPEP-DB. For proper visualization, please ensure that you open the file with only comma (,) as delimitator.
All positives .fasta List of all positive peptides collected in the database
All negatives .txt List of all negative peptide IDs obtained after the screening
Neuropeptides .fasta Human neuropeptides from NeuroPep used for the screening
AMPs .fasta Human AMPs from DRAMP used for the screening
Gut microbiota .fasta Human gut microbiome peptides from DRAMP-GMrepo used for the screening
Food-derived bioactive peptides .fasta Food-derived bioactive peptides from DFBP used for the screening
AlphaFold PDBs .zip AF PDB files for all positive hits
Helical wheels .zip SVG files with the helical wheel represenation for all positive hits
DispHred plots .zip SVG files with pH-dependent order profile for all positive hits
GitHub repository .git Repository with all files needed for running the database
© 2023 Protein Folding and Conformational Diseases Lab / Bioinformatics corner